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Sometimes when shutting down the machine with Orca running, it takes a long time to shut down with a countdown about a stop job running. I think the problem is that at-spi registry daemon is killed before Orca which prevents Orca from responding to the signal to stop running but I am not sure.
Mmm, It looks like a duplicate of http://bugs.debian.org/890833
Could you check in your systemd logs if you have something like:
lut 06 14:30:47 B2-46-AA-2018 systemd: at-spi-dbus-bus.service: State 'stop-sigterm' timed out. Killing.
lut 06 14:30:47 B2-46-AA-2018 systemd: pam_unix(systemd-user:session): session closed for user
lut 06 14:30:47 B2-46-AA-2018 systemd: at-spi-dbus-bus.service: Killing process 648 (at-spi-bus-laun)
with signal SIGKILL.
When that happens?